Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CDCA4P2-201ENST00000441182 718 ntBASIC18.45■□□□□ 0.54
CUBNO60494 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.45■□□□□ 0.54
CUBNO60494 AC104771.1-201ENST00000603335 964 ntBASIC18.45■□□□□ 0.54
CUBNO60494 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUBNO60494 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUBNO60494 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.45■□□□□ 0.54
CUBNO60494 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CUBNO60494 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUBNO60494 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.44■□□□□ 0.54
CUBNO60494 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.44■□□□□ 0.54
CUBNO60494 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CUBNO60494 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.44■□□□□ 0.54
CUBNO60494 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CUBNO60494 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.43■□□□□ 0.54
CUBNO60494 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.43■□□□□ 0.54
CUBNO60494 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CUBNO60494 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUBNO60494 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CUBNO60494 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.43■□□□□ 0.54
CUBNO60494 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.43■□□□□ 0.54
CUBNO60494 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.43■□□□□ 0.54
CUBNO60494 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.43■□□□□ 0.54
CUBNO60494 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.43■□□□□ 0.54
CUBNO60494 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUBNO60494 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CUBNO60494 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.43■□□□□ 0.54
CUBNO60494 KRT18P14-201ENST00000534205 1250 ntBASIC18.43■□□□□ 0.54
CUBNO60494 KRT18P61-201ENST00000585825 1298 ntBASIC18.43■□□□□ 0.54
CUBNO60494 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CUBNO60494 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.43■□□□□ 0.54
CUBNO60494 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.42■□□□□ 0.54
CUBNO60494 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.42■□□□□ 0.54
CUBNO60494 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CUBNO60494 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.42■□□□□ 0.54
CUBNO60494 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.42■□□□□ 0.54
CUBNO60494 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CUBNO60494 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUBNO60494 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.41■□□□□ 0.54
CUBNO60494 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CUBNO60494 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUBNO60494 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.41■□□□□ 0.54
CUBNO60494 CCDC92B-201ENST00000575506 885 ntBASIC18.41■□□□□ 0.54
CUBNO60494 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CUBNO60494 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.41■□□□□ 0.54
CUBNO60494 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CUBNO60494 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CUBNO60494 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CUBNO60494 AL358852.1-201ENST00000623174 1268 ntBASIC18.41■□□□□ 0.54
CUBNO60494 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CUBNO60494 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.4■□□□□ 0.54
CUBNO60494 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CUBNO60494 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUBNO60494 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUBNO60494 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.4■□□□□ 0.54
CUBNO60494 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CUBNO60494 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CUBNO60494 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.4■□□□□ 0.54
CUBNO60494 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CUBNO60494 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.4■□□□□ 0.54
CUBNO60494 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.4■□□□□ 0.54
CUBNO60494 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CUBNO60494 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.39■□□□□ 0.53
CUBNO60494 AC006015.1-201ENST00000429970 570 ntBASIC18.39■□□□□ 0.53
CUBNO60494 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
CUBNO60494 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CUBNO60494 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CUBNO60494 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.38■□□□□ 0.53
CUBNO60494 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CUBNO60494 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.38■□□□□ 0.53
CUBNO60494 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CUBNO60494 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CUBNO60494 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CUBNO60494 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 AC097639.1-201ENST00000565519 1891 ntBASIC18.38■□□□□ 0.53
CUBNO60494 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CUBNO60494 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CUBNO60494 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.37■□□□□ 0.53
CUBNO60494 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CUBNO60494 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CUBNO60494 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.37■□□□□ 0.53
CUBNO60494 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.37■□□□□ 0.53
CUBNO60494 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms