Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DLX3O60479 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
DLX3O60479 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DLX3O60479 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DLX3O60479 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
DLX3O60479 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.36■■□□□ 1.17
DLX3O60479 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.36■■□□□ 1.17
DLX3O60479 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DLX3O60479 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DLX3O60479 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.35■■□□□ 1.17
DLX3O60479 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
DLX3O60479 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DLX3O60479 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DLX3O60479 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.35■■□□□ 1.17
DLX3O60479 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DLX3O60479 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.35■■□□□ 1.17
DLX3O60479 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.34■■□□□ 1.17
DLX3O60479 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
DLX3O60479 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DLX3O60479 ALDH1A3-203ENST00000557963 1670 ntBASIC22.33■■□□□ 1.17
DLX3O60479 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DLX3O60479 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DLX3O60479 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DLX3O60479 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DLX3O60479 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.33■■□□□ 1.17
DLX3O60479 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DLX3O60479 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DLX3O60479 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
DLX3O60479 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
DLX3O60479 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
DLX3O60479 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
DLX3O60479 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DLX3O60479 AL117328.2-201ENST00000624617 1940 ntBASIC22.32■■□□□ 1.16
DLX3O60479 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.32■■□□□ 1.16
DLX3O60479 AC019171.1-201ENST00000601251 1056 ntBASIC22.32■■□□□ 1.16
DLX3O60479 AC233723.2-201ENST00000623798 2106 ntBASIC22.32■■□□□ 1.16
DLX3O60479 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DLX3O60479 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
DLX3O60479 C1orf229-201ENST00000623686 2258 ntBASIC22.32■■□□□ 1.16
DLX3O60479 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DLX3O60479 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
DLX3O60479 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
DLX3O60479 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.31■■□□□ 1.16
DLX3O60479 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
DLX3O60479 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
DLX3O60479 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
DLX3O60479 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.31■■□□□ 1.16
DLX3O60479 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DLX3O60479 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
DLX3O60479 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
DLX3O60479 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
DLX3O60479 DUX4L18-201ENST00000553347 1267 ntBASIC22.3■■□□□ 1.16
DLX3O60479 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.3■■□□□ 1.16
DLX3O60479 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.3■■□□□ 1.16
DLX3O60479 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DLX3O60479 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.3■■□□□ 1.16
DLX3O60479 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
DLX3O60479 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.29■■□□□ 1.16
DLX3O60479 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.29■■□□□ 1.16
DLX3O60479 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
DLX3O60479 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.29■■□□□ 1.16
DLX3O60479 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.29■■□□□ 1.16
DLX3O60479 AC022616.5-201ENST00000518796 181 ntBASIC22.29■■□□□ 1.16
DLX3O60479 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
DLX3O60479 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
DLX3O60479 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms