Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXS1O43638 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXS1O43638 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXS1O43638 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXS1O43638 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXS1O43638 MIR4466-201ENST00000606121 54 ntBASIC21.58■■□□□ 1.05
FOXS1O43638 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXS1O43638 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
FOXS1O43638 AC008406.3-201ENST00000620001 1374 ntBASIC21.58■■□□□ 1.04
FOXS1O43638 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
FOXS1O43638 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXS1O43638 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FOXS1O43638 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXS1O43638 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXS1O43638 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXS1O43638 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXS1O43638 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.57■■□□□ 1.04
FOXS1O43638 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXS1O43638 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
FOXS1O43638 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
FOXS1O43638 AC004812.2-201ENST00000611079 2094 ntBASIC21.56■■□□□ 1.04
FOXS1O43638 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
FOXS1O43638 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXS1O43638 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
FOXS1O43638 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
FOXS1O43638 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXS1O43638 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXS1O43638 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXS1O43638 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
FOXS1O43638 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXS1O43638 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXS1O43638 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXS1O43638 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXS1O43638 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXS1O43638 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXS1O43638 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
FOXS1O43638 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXS1O43638 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
FOXS1O43638 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXS1O43638 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXS1O43638 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXS1O43638 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXS1O43638 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
FOXS1O43638 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXS1O43638 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXS1O43638 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXS1O43638 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXS1O43638 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXS1O43638 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXS1O43638 AL136116.3-201ENST00000402907 1138 ntBASIC21.52■■□□□ 1.04
FOXS1O43638 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXS1O43638 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
FOXS1O43638 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.52■■□□□ 1.03
FOXS1O43638 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXS1O43638 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
FOXS1O43638 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXS1O43638 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.51■■□□□ 1.03
FOXS1O43638 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXS1O43638 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXS1O43638 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXS1O43638 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.5■■□□□ 1.03
FOXS1O43638 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXS1O43638 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
FOXS1O43638 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
FOXS1O43638 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FOXS1O43638 AC009102.2-201ENST00000606772 1639 ntBASIC21.49■■□□□ 1.03
FOXS1O43638 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.49■■□□□ 1.03
FOXS1O43638 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.49■■□□□ 1.03
FOXS1O43638 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FOXS1O43638 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
FOXS1O43638 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.49■■□□□ 1.03
FOXS1O43638 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms