Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 AC009086.3-201ENST00000623486 1008 ntBASIC29.85■■■□□ 2.37
KCNQ2O43526 TSPY26P-201ENST00000476365 1326 ntBASIC29.85■■■□□ 2.37
KCNQ2O43526 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
KCNQ2O43526 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
KCNQ2O43526 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
KCNQ2O43526 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.84■■■□□ 2.37
KCNQ2O43526 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.84■■■□□ 2.37
KCNQ2O43526 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.84■■■□□ 2.37
KCNQ2O43526 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.84■■■□□ 2.37
KCNQ2O43526 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.84■■■□□ 2.37
KCNQ2O43526 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.84■■■□□ 2.37
KCNQ2O43526 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
KCNQ2O43526 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNQ2O43526 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNQ2O43526 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.83■■■□□ 2.37
KCNQ2O43526 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
KCNQ2O43526 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
KCNQ2O43526 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
KCNQ2O43526 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
KCNQ2O43526 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
KCNQ2O43526 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
KCNQ2O43526 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
KCNQ2O43526 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.81■■■□□ 2.36
KCNQ2O43526 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
KCNQ2O43526 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
KCNQ2O43526 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ2O43526 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ2O43526 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
KCNQ2O43526 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ2O43526 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.81■■■□□ 2.36
KCNQ2O43526 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.81■■■□□ 2.36
KCNQ2O43526 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNQ2O43526 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
KCNQ2O43526 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.8■■■□□ 2.36
KCNQ2O43526 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ2O43526 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.8■■■□□ 2.36
KCNQ2O43526 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.8■■■□□ 2.36
KCNQ2O43526 MIR6084-201ENST00000622012 110 ntBASIC29.8■■■□□ 2.36
KCNQ2O43526 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ2O43526 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ2O43526 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
KCNQ2O43526 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
KCNQ2O43526 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
KCNQ2O43526 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
KCNQ2O43526 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ2O43526 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
KCNQ2O43526 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.79■■■□□ 2.36
KCNQ2O43526 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ2O43526 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ2O43526 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
KCNQ2O43526 AC027612.3-201ENST00000413684 1047 ntBASIC29.78■■■□□ 2.36
KCNQ2O43526 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.78■■■□□ 2.36
KCNQ2O43526 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.78■■■□□ 2.36
KCNQ2O43526 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNQ2O43526 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNQ2O43526 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KCNQ2O43526 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KCNQ2O43526 AC123595.1-201ENST00000440769 1046 ntBASIC29.77■■■□□ 2.36
KCNQ2O43526 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.77■■■□□ 2.36
KCNQ2O43526 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.77■■■□□ 2.36
KCNQ2O43526 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
KCNQ2O43526 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
KCNQ2O43526 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNQ2O43526 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.76■■■□□ 2.35
KCNQ2O43526 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.76■■■□□ 2.35
KCNQ2O43526 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.76■■■□□ 2.35
KCNQ2O43526 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
KCNQ2O43526 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
KCNQ2O43526 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNQ2O43526 CCDC92B-201ENST00000575506 885 ntBASIC29.75■■■□□ 2.35
KCNQ2O43526 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.75■■■□□ 2.35
KCNQ2O43526 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.75■■■□□ 2.35
KCNQ2O43526 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNQ2O43526 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNQ2O43526 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNQ2O43526 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
KCNQ2O43526 AC010501.1-201ENST00000606270 1962 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNQ2O43526 pRNA.6-201ENST00000610482 90 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 pRNA.5-201ENST00000612139 90 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 pRNA.11-201ENST00000618423 90 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 pRNA.13-201ENST00000619112 90 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 TMEM191A-211ENST00000637163 1067 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.74■■■□□ 2.35
KCNQ2O43526 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.74■■■□□ 2.35
KCNQ2O43526 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
KCNQ2O43526 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.73■■■□□ 2.35
KCNQ2O43526 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.73■■■□□ 2.35
KCNQ2O43526 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.73■■■□□ 2.35
KCNQ2O43526 AL358852.1-201ENST00000623174 1268 ntBASIC29.73■■■□□ 2.35
KCNQ2O43526 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.73■■■□□ 2.35
KCNQ2O43526 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.73■■■□□ 2.35
KCNQ2O43526 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms