Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.58■■■□□ 2.33
CHL1O00533 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.58■■■□□ 2.33
CHL1O00533 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.58■■■□□ 2.33
CHL1O00533 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CHL1O00533 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHL1O00533 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CHL1O00533 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.57■■■□□ 2.32
CHL1O00533 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.57■■■□□ 2.32
CHL1O00533 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.57■■■□□ 2.32
CHL1O00533 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.57■■■□□ 2.32
CHL1O00533 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.56■■■□□ 2.32
CHL1O00533 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHL1O00533 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHL1O00533 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHL1O00533 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CHL1O00533 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
CHL1O00533 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.56■■■□□ 2.32
CHL1O00533 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHL1O00533 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CHL1O00533 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHL1O00533 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHL1O00533 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
CHL1O00533 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CHL1O00533 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHL1O00533 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHL1O00533 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
CHL1O00533 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.54■■■□□ 2.32
CHL1O00533 AC009102.2-201ENST00000606772 1639 ntBASIC29.54■■■□□ 2.32
CHL1O00533 PREB-202ENST00000406567 1910 ntTSL 5 BASIC29.54■■■□□ 2.32
CHL1O00533 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.54■■■□□ 2.32
CHL1O00533 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.54■■■□□ 2.32
CHL1O00533 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
CHL1O00533 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHL1O00533 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CHL1O00533 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.53■■■□□ 2.32
CHL1O00533 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHL1O00533 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CHL1O00533 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.52■■■□□ 2.32
CHL1O00533 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.52■■■□□ 2.32
CHL1O00533 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
CHL1O00533 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHL1O00533 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.52■■■□□ 2.32
CHL1O00533 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.52■■■□□ 2.32
CHL1O00533 AC004812.2-201ENST00000611079 2094 ntBASIC29.51■■■□□ 2.31
CHL1O00533 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHL1O00533 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHL1O00533 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.51■■■□□ 2.31
CHL1O00533 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
CHL1O00533 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.51■■■□□ 2.31
CHL1O00533 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHL1O00533 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CHL1O00533 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHL1O00533 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.51■■■□□ 2.31
CHL1O00533 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHL1O00533 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.5■■■□□ 2.31
CHL1O00533 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CHL1O00533 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.5■■■□□ 2.31
CHL1O00533 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHL1O00533 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.5■■■□□ 2.31
CHL1O00533 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CHL1O00533 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
CHL1O00533 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.5■■■□□ 2.31
CHL1O00533 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHL1O00533 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHL1O00533 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CHL1O00533 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHL1O00533 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.48■■■□□ 2.31
CHL1O00533 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CHL1O00533 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CHL1O00533 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHL1O00533 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHL1O00533 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHL1O00533 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.47■■■□□ 2.31
CHL1O00533 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHL1O00533 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHL1O00533 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHL1O00533 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.46■■■□□ 2.31
CHL1O00533 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHL1O00533 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.46■■■□□ 2.31
CHL1O00533 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHL1O00533 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHL1O00533 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHL1O00533 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CHL1O00533 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CHL1O00533 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHL1O00533 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.44■■■□□ 2.3
CHL1O00533 C17orf82-201ENST00000623772 1530 ntBASIC29.44■■■□□ 2.3
CHL1O00533 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.44■■■□□ 2.3
CHL1O00533 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
CHL1O00533 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CHL1O00533 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.43■■■□□ 2.3
CHL1O00533 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CHL1O00533 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms