Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ALDH1A3-203ENST00000557963 1670 ntBASIC18.26■□□□□ 0.51
UPK2O00526 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK2O00526 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK2O00526 AC120024.1-201ENST00000562672 995 ntBASIC18.26■□□□□ 0.51
UPK2O00526 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.26■□□□□ 0.51
UPK2O00526 AC074183.2-201ENST00000623112 922 ntBASIC18.26■□□□□ 0.51
UPK2O00526 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UPK2O00526 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK2O00526 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
UPK2O00526 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPK2O00526 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPK2O00526 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UPK2O00526 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UPK2O00526 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK2O00526 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UPK2O00526 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.25■□□□□ 0.51
UPK2O00526 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.25■□□□□ 0.51
UPK2O00526 AC004987.1-201ENST00000428627 508 ntBASIC18.25■□□□□ 0.51
UPK2O00526 ATP5G2P3-201ENST00000429083 425 ntBASIC18.25■□□□□ 0.51
UPK2O00526 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.25■□□□□ 0.51
UPK2O00526 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.25■□□□□ 0.51
UPK2O00526 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK2O00526 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK2O00526 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
UPK2O00526 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK2O00526 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK2O00526 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UPK2O00526 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK2O00526 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 DUSP8P3-201ENST00000399571 1760 ntBASIC18.24■□□□□ 0.51
UPK2O00526 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK2O00526 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UPK2O00526 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UPK2O00526 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.23■□□□□ 0.51
UPK2O00526 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK2O00526 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UPK2O00526 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UPK2O00526 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UPK2O00526 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UPK2O00526 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK2O00526 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
UPK2O00526 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK2O00526 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK2O00526 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UPK2O00526 KRT18P24-201ENST00000344739 1156 ntBASIC18.22■□□□□ 0.51
UPK2O00526 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.22■□□□□ 0.51
UPK2O00526 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK2O00526 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK2O00526 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK2O00526 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK2O00526 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
UPK2O00526 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK2O00526 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK2O00526 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
UPK2O00526 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.21■□□□□ 0.51
UPK2O00526 PVT1_1.1-201ENST00000615125 194 ntBASIC18.21■□□□□ 0.51
UPK2O00526 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK2O00526 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.21■□□□□ 0.51
UPK2O00526 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPK2O00526 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPK2O00526 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPK2O00526 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK2O00526 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK2O00526 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK2O00526 THA1P-201ENST00000590384 1145 ntBASIC18.2■□□□□ 0.5
UPK2O00526 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK2O00526 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK2O00526 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK2O00526 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UPK2O00526 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK2O00526 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms