Protein–RNA interactions for Protein: C9JDP6

CLDN25, Putative claudin-25, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN25C9JDP6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN25C9JDP6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN25C9JDP6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.7■□□□□ 0.9
CLDN25C9JDP6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN25C9JDP6 AL137060.1-201ENST00000618151 2648 ntBASIC20.7■□□□□ 0.9
CLDN25C9JDP6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN25C9JDP6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN25C9JDP6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN25C9JDP6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.69■□□□□ 0.9
CLDN25C9JDP6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLDN25C9JDP6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 AL359504.2-201ENST00000605506 1601 ntBASIC20.68■□□□□ 0.9
CLDN25C9JDP6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 AC133552.2-201ENST00000619106 1032 ntBASIC20.68■□□□□ 0.9
CLDN25C9JDP6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN25C9JDP6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 AC093536.1-201ENST00000569153 554 ntBASIC20.67■□□□□ 0.9
CLDN25C9JDP6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 AC009831.1-201ENST00000580420 1582 ntBASIC20.67■□□□□ 0.9
CLDN25C9JDP6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN25C9JDP6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 KRT18P60-201ENST00000312876 1297 ntBASIC20.66■□□□□ 0.9
CLDN25C9JDP6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN25C9JDP6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLDN25C9JDP6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CLDN25C9JDP6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CLDN25C9JDP6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 AC026202.3-201ENST00000600805 1127 ntBASIC20.64■□□□□ 0.89
CLDN25C9JDP6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN25C9JDP6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN25C9JDP6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CLDN25C9JDP6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN25C9JDP6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms