Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3D21A4FU49 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3D21A4FU49 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SH3D21A4FU49 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SH3D21A4FU49 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.05■□□□□ 0.96
SH3D21A4FU49 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3D21A4FU49 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH3D21A4FU49 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.04■□□□□ 0.96
SH3D21A4FU49 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SH3D21A4FU49 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SH3D21A4FU49 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH3D21A4FU49 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.03■□□□□ 0.96
SH3D21A4FU49 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SH3D21A4FU49 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SH3D21A4FU49 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH3D21A4FU49 THA1P-201ENST00000590384 1145 ntBASIC21.02■□□□□ 0.96
SH3D21A4FU49 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH3D21A4FU49 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3D21A4FU49 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.02■□□□□ 0.96
SH3D21A4FU49 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH3D21A4FU49 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH3D21A4FU49 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SH3D21A4FU49 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SH3D21A4FU49 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3D21A4FU49 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH3D21A4FU49 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.01■□□□□ 0.95
SH3D21A4FU49 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.01■□□□□ 0.95
SH3D21A4FU49 AC239859.2-201ENST00000444165 318 ntBASIC21.01■□□□□ 0.95
SH3D21A4FU49 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21■□□□□ 0.95
SH3D21A4FU49 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21■□□□□ 0.95
SH3D21A4FU49 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SH3D21A4FU49 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 AL592295.1-201ENST00000400984 884 ntBASIC20.99■□□□□ 0.95
SH3D21A4FU49 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 AC022616.5-201ENST00000518796 181 ntBASIC20.99■□□□□ 0.95
SH3D21A4FU49 Z92544.1-202ENST00000571933 1220 ntBASIC20.99■□□□□ 0.95
SH3D21A4FU49 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SH3D21A4FU49 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SH3D21A4FU49 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.98■□□□□ 0.95
SH3D21A4FU49 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
SH3D21A4FU49 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SH3D21A4FU49 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SH3D21A4FU49 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SH3D21A4FU49 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms