Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.33■■■□□ 2.61
SBNO1A3KN83 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.33■■■□□ 2.61
SBNO1A3KN83 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SBNO1A3KN83 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.33■■■□□ 2.61
SBNO1A3KN83 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SBNO1A3KN83 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
SBNO1A3KN83 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.32■■■□□ 2.6
SBNO1A3KN83 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.32■■■□□ 2.6
SBNO1A3KN83 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L2-201ENST00000561772 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.32■■■□□ 2.6
SBNO1A3KN83 AC009086.3-201ENST00000623486 1008 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L6-201ENST00000626483 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L1-201ENST00000627662 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L8-201ENST00000629013 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L3-201ENST00000630187 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L7-201ENST00000630678 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 DUX4L5-201ENST00000630834 1275 ntBASIC31.32■■■□□ 2.6
SBNO1A3KN83 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SBNO1A3KN83 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SBNO1A3KN83 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
SBNO1A3KN83 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SBNO1A3KN83 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SBNO1A3KN83 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SBNO1A3KN83 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SBNO1A3KN83 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SBNO1A3KN83 SLC47A1P1-202ENST00000449666 945 ntBASIC31.3■■■□□ 2.6
SBNO1A3KN83 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SBNO1A3KN83 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SBNO1A3KN83 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.3■■■□□ 2.6
SBNO1A3KN83 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SBNO1A3KN83 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
SBNO1A3KN83 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SBNO1A3KN83 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.29■■■□□ 2.6
SBNO1A3KN83 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.29■■■□□ 2.6
SBNO1A3KN83 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SBNO1A3KN83 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SBNO1A3KN83 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.28■■■□□ 2.6
SBNO1A3KN83 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SBNO1A3KN83 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.28■■■□□ 2.6
SBNO1A3KN83 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SBNO1A3KN83 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SBNO1A3KN83 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SBNO1A3KN83 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.27■■■□□ 2.6
SBNO1A3KN83 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SBNO1A3KN83 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.27■■■□□ 2.6
SBNO1A3KN83 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC31.27■■■□□ 2.6
SBNO1A3KN83 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SBNO1A3KN83 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SBNO1A3KN83 AC027612.3-201ENST00000413684 1047 ntBASIC31.27■■■□□ 2.6
SBNO1A3KN83 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.27■■■□□ 2.6
SBNO1A3KN83 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.26■■■□□ 2.59
SBNO1A3KN83 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SBNO1A3KN83 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
SBNO1A3KN83 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SBNO1A3KN83 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SBNO1A3KN83 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SBNO1A3KN83 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.25■■■□□ 2.59
SBNO1A3KN83 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SBNO1A3KN83 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SBNO1A3KN83 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.23■■■□□ 2.59
SBNO1A3KN83 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SBNO1A3KN83 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC31.23■■■□□ 2.59
SBNO1A3KN83 MIR6089-201ENST00000616698 64 ntBASIC31.23■■■□□ 2.59
SBNO1A3KN83 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SBNO1A3KN83 DUSP8P4-201ENST00000399538 1761 ntBASIC31.23■■■□□ 2.59
SBNO1A3KN83 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SBNO1A3KN83 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC31.22■■■□□ 2.59
SBNO1A3KN83 AL022069.1-201ENST00000568025 1636 ntBASIC31.22■■■□□ 2.59
SBNO1A3KN83 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
SBNO1A3KN83 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.22■■■□□ 2.59
SBNO1A3KN83 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.21■■■□□ 2.59
SBNO1A3KN83 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SBNO1A3KN83 AC123595.1-201ENST00000440769 1046 ntBASIC31.21■■■□□ 2.59
SBNO1A3KN83 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SBNO1A3KN83 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.21■■■□□ 2.59
SBNO1A3KN83 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SBNO1A3KN83 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SBNO1A3KN83 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms