Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 AC090877.2-201ENST00000558441 1738 ntBASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 AC007029.1-201ENST00000604183 313 ntBASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 AC016575.1-201ENST00000607026 382 ntBASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUXBA0A1W2PPF3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.58■□□□□ 0.57
DUXBA0A1W2PPF3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
DUXBA0A1W2PPF3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUXBA0A1W2PPF3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUXBA0A1W2PPF3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
DUXBA0A1W2PPF3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 RAP2CP1-202ENST00000605179 643 ntBASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 ESRRAP2-201ENST00000418437 1549 ntBASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUXBA0A1W2PPF3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUXBA0A1W2PPF3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 AC026202.3-201ENST00000600805 1127 ntBASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DUXBA0A1W2PPF3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DUXBA0A1W2PPF3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 AC242852.2-201ENST00000615738 1807 ntBASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DUXBA0A1W2PPF3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DUXBA0A1W2PPF3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms