Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRDV1A0A1B0GX56 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 CR559946.2-201ENST00000623684 991 ntBASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 ESRRAP2-201ENST00000418437 1549 ntBASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRDV1A0A1B0GX56 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 AL024507.2-201ENST00000606070 2574 ntBASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.04■□□□□ 0.8
TRDV1A0A1B0GX56 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 RP9P-202ENST00000450133 1212 ntBASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRDV1A0A1B0GX56 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 AC060814.1-201ENST00000554326 538 ntBASIC20.02■□□□□ 0.8
TRDV1A0A1B0GX56 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.02■□□□□ 0.79
TRDV1A0A1B0GX56 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRDV1A0A1B0GX56 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRDV1A0A1B0GX56 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRDV1A0A1B0GX56 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRDV1A0A1B0GX56 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.99■□□□□ 0.79
TRDV1A0A1B0GX56 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRDV1A0A1B0GX56 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms