Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV19A0A075B6N1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV19A0A075B6N1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV19A0A075B6N1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 AL592293.1-201ENST00000502889 1188 ntBASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV19A0A075B6N1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV19A0A075B6N1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 C1orf229-201ENST00000623686 2258 ntBASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 MIR6765-201ENST00000614092 87 ntBASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRBV19A0A075B6N1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
TRBV19A0A075B6N1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV19A0A075B6N1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV19A0A075B6N1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TRBV19A0A075B6N1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 LONRF2P2-201ENST00000439212 571 ntBASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 DUX4L9-201ENST00000449051 1259 ntBASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV19A0A075B6N1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV19A0A075B6N1 EP400NL-214ENST00000641289 2402 ntBASIC17.3■□□□□ 0.36
TRBV19A0A075B6N1 ALDH1A3-203ENST00000557963 1670 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms