Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 BCL2L12P1-201ENST00000508390 733 ntBASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 KNOP1P1-201ENST00000542108 989 ntBASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.57■□□□□ 0.4
ZC3H4Q9UPT8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AC092580.1-201ENST00000433998 658 ntBASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 RN7SL277P-201ENST00000481521 288 ntBASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AC092862.1-201ENST00000541534 533 ntBASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AC013553.1-201ENST00000560906 267 ntBASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZC3H4Q9UPT8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 AC124068.2-201ENST00000569473 1109 ntBASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 TRMT112P3-201ENST00000580149 358 ntBASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.55■□□□□ 0.4
ZC3H4Q9UPT8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms