Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
MBD2Q9UBB5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
MBD2Q9UBB5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CSPG4P12-201ENST00000558282 4853 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 HERC2P10-201ENST00000570209 2393 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 IGLL3P-201ENST00000412472 434 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 REXO1L6P-202ENST00000619970 1078 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 AL161645.1-201ENST00000622716 1255 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 AL645728.2-202ENST00000641679 227 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
MBD2Q9UBB5 CSPG4P13-202ENST00000567704 4801 ntBASIC12.39□□□□□ -0.43
MBD2Q9UBB5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AC012313.8-201ENST00000595059 5402 ntBASIC12.38□□□□□ -0.43
MBD2Q9UBB5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 ATP5G2P1-201ENST00000433580 426 ntBASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AL049597.2-201ENST00000565575 961 ntBASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 AC026979.3-201ENST00000607315 403 ntBASIC12.38□□□□□ -0.43
MBD2Q9UBB5 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MBD2Q9UBB5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms