Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC113367.3-201ENST00000508316 1912 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AP001267.2-201ENST00000532619 2086 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC092135.3-201ENST00000624151 1846 ntBASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 SLC25A24P2-201ENST00000415059 510 ntBASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC006033.1-201ENST00000440505 426 ntBASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC023310.1-201ENST00000554836 735 ntBASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AC002472.3-201ENST00000640124 621 ntBASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CUEDC1Q9NWM3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms