Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 MIR33B-201ENST00000385104 96 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ELK2AP-201ENST00000392510 1007 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 NDUFS6P1-201ENST00000485187 316 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 MIR3677-201ENST00000578964 60 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 AC152010.1-201ENST00000415779 2006 ntBASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
KIAA1549Q9HCM3 AHCYP4-201ENST00000419201 1315 ntBASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 AC012044.1-201ENST00000603431 297 ntBASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KIAA1549Q9HCM3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AL008707.1-201ENST00000422498 534 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC011742.3-201ENST00000439053 820 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AL133466.1-201ENST00000447582 150 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC020922.3-201ENST00000595064 547 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC009884.2-201ENST00000603110 324 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AL109837.1-201ENST00000603272 613 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 AC090386.2-201ENST00000623010 1039 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 HSPA7-201ENST00000445535 1927 ntBASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
KIAA1549Q9HCM3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms