Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 ACTG1P3-201ENST00000431775 1114 ntBASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 AC006538.3-201ENST00000612495 578 ntBASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 KRT8P28-201ENST00000433288 1390 ntBASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM38AQ9H6F2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC134312.5-201ENST00000568031 1313 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC009093.10-201ENST00000641956 1442 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC011495.1-201ENST00000498085 584 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PTP4A1P2-201ENST00000546033 454 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC140912.1-201ENST00000577171 1054 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC104506.1-201ENST00000609247 429 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AC009093.2-202ENST00000620513 2079 ntBASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM38AQ9H6F2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 AC105206.1-202ENST00000314927 2368 ntBASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM38AQ9H6F2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms