Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN18Q99952 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN18Q99952 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN18Q99952 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PTPN18Q99952 CHCHD2P2-201ENST00000503744 321 ntBASIC16.51■□□□□ 0.23
PTPN18Q99952 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN18Q99952 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN18Q99952 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN18Q99952 AC145285.5-201ENST00000562217 361 ntBASIC16.51■□□□□ 0.23
PTPN18Q99952 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN18Q99952 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN18Q99952 AL160191.2-201ENST00000603975 601 ntBASIC16.51■□□□□ 0.23
PTPN18Q99952 AP000769.1-203ENST00000637245 208 ntBASIC16.51■□□□□ 0.23
PTPN18Q99952 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN18Q99952 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN18Q99952 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN18Q99952 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN18Q99952 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN18Q99952 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN18Q99952 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTPN18Q99952 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN18Q99952 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN18Q99952 AL451000.1-201ENST00000451300 1186 ntBASIC16.5■□□□□ 0.23
PTPN18Q99952 AC005740.1-201ENST00000515639 522 ntBASIC16.5■□□□□ 0.23
PTPN18Q99952 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN18Q99952 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN18Q99952 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN18Q99952 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN18Q99952 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN18Q99952 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN18Q99952 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN18Q99952 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN18Q99952 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN18Q99952 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 AF274858.1-201ENST00000406288 372 ntBASIC16.49■□□□□ 0.23
PTPN18Q99952 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC006987.1-201ENST00000413610 527 ntBASIC16.49■□□□□ 0.23
PTPN18Q99952 AC023141.7-201ENST00000430646 407 ntBASIC16.49■□□□□ 0.23
PTPN18Q99952 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN18Q99952 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC023968.2-201ENST00000560593 1049 ntBASIC16.49■□□□□ 0.23
PTPN18Q99952 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 AC026691.1-201ENST00000602502 2017 ntBASIC16.49■□□□□ 0.23
PTPN18Q99952 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN18Q99952 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN18Q99952 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN18Q99952 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN18Q99952 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms