Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AL157407.1-201ENST00000435784 904 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AL645933.1-201ENST00000440087 609 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 MIR6720-201ENST00000611664 98 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AL096828.3-201ENST00000615354 462 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 MIR6752-201ENST00000618442 71 ntBASIC12.22□□□□□ -0.45
GAFA1Q96PS6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.22□□□□□ -0.45
GAFA1Q96PS6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC005089.1-201ENST00000619486 2241 ntBASIC12.21□□□□□ -0.45
GAFA1Q96PS6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 MIR663B-201ENST00000408361 115 ntBASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 KLF2P1-201ENST00000447438 1042 ntBASIC12.21□□□□□ -0.45
GAFA1Q96PS6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC005730.2-201ENST00000564549 1184 ntBASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.21□□□□□ -0.45
GAFA1Q96PS6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 AC011498.7-201ENST00000624986 2027 ntBASIC12.21□□□□□ -0.46
GAFA1Q96PS6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.21□□□□□ -0.46
GAFA1Q96PS6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms