Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AL022328.1-201ENST00000610050 478 ntBASIC15.59■□□□□ 0.09
TRIM11Q96F44 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM11Q96F44 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 MST1P2-201ENST00000457982 2291 ntBASIC15.59■□□□□ 0.09
TRIM11Q96F44 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM11Q96F44 AC011498.7-201ENST00000624986 2027 ntBASIC15.58■□□□□ 0.09
TRIM11Q96F44 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRIM11Q96F44 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM11Q96F44 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AC004945.1-201ENST00000416738 983 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 ARSEP1-201ENST00000420443 635 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 SLC25A47P1-201ENST00000531577 414 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AC025048.6-201ENST00000634326 1161 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 AL358472.5-202ENST00000641448 1267 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AC012617.1-204ENST00000586340 2305 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AC009093.10-201ENST00000641956 1442 ntBASIC15.58■□□□□ 0.08
TRIM11Q96F44 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM11Q96F44 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM11Q96F44 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC041040.2-201ENST00000622926 2899 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM11Q96F44 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC092933.1-201ENST00000393644 945 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC027237.1-201ENST00000560942 655 ntBASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM11Q96F44 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms