Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 FO393414.2-201ENST00000405153 598 ntBASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 AC021087.4-201ENST00000563761 564 ntBASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 AC115284.2-201ENST00000624646 2054 ntBASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHCHD1Q96BP2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 TRIM80P-201ENST00000455685 2848 ntBASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 AC073957.3-201ENST00000609998 6758 ntBASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PI4KAP2-201ENST00000360806 2080 ntBASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 AL596275.1-201ENST00000423464 877 ntBASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 SLED1-202ENST00000512051 380 ntBASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.71□□□□□ -0.69
CHCHD1Q96BP2 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms