Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 FAM86MP-201ENST00000340703 885 ntBASIC13.07□□□□□ -0.32
APH1AQ96BI3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AC021723.1-201ENST00000486306 515 ntBASIC13.07□□□□□ -0.32
APH1AQ96BI3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 FAM8A2P-201ENST00000528813 1142 ntBASIC13.07□□□□□ -0.32
APH1AQ96BI3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AC005695.3-201ENST00000614522 232 ntBASIC13.07□□□□□ -0.32
APH1AQ96BI3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AL096828.3-201ENST00000615354 462 ntBASIC13.07□□□□□ -0.32
APH1AQ96BI3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1AQ96BI3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 POM121L10P-201ENST00000436994 1285 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 FAM58BP-201ENST00000439056 645 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 AL591846.1-201ENST00000451736 433 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AC132192.2-201ENST00000596206 1147 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 AC007686.3-201ENST00000619017 3487 ntBASIC13.06□□□□□ -0.32
APH1AQ96BI3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.06□□□□□ -0.32
APH1AQ96BI3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1AQ96BI3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms