Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMARCE1Q969G3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMARCE1Q969G3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
SMARCE1Q969G3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMARCE1Q969G3 MRPL37P1-201ENST00000592451 1337 ntBASIC16.67■□□□□ 0.26
SMARCE1Q969G3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMARCE1Q969G3 AC007541.1-201ENST00000570282 1469 ntBASIC16.67■□□□□ 0.26
SMARCE1Q969G3 RN7SL832P-201ENST00000607781 1756 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 AC099521.3-201ENST00000624251 2938 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 DMBT1P1-203ENST00000636837 4628 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 FO681548.1-201ENST00000455617 1132 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 KRT18P25-201ENST00000508931 1278 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 CHCHD2P3-201ENST00000603038 451 ntBASIC16.66■□□□□ 0.26
SMARCE1Q969G3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCE1Q969G3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 MBLAC2-202ENST00000514906 1936 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 ACKR1-201ENST00000368121 1240 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AC087499.6-201ENST00000411576 835 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AC131206.1-201ENST00000538078 1211 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AC006538.3-201ENST00000612495 578 ntBASIC16.65■□□□□ 0.26
SMARCE1Q969G3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCE1Q969G3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms