Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRFBP1Q8NEF9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SRFBP1Q8NEF9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRFBP1Q8NEF9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SRFBP1Q8NEF9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AC015802.1-201ENST00000588104 1449 ntBASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 HOMER2P2-201ENST00000451621 847 ntBASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AP005482.1-201ENST00000563722 1273 ntBASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AP001002.3-201ENST00000623482 206 ntBASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AC015688.4-201ENST00000580780 1647 ntBASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRFBP1Q8NEF9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ACA64.2-201ENST00000459014 129 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AC103988.2-201ENST00000561804 725 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 C2orf69P2-201ENST00000562032 1123 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AC073413.1-201ENST00000603927 732 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 AC139712.1-201ENST00000378256 1875 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 MYADML-201ENST00000474610 2147 ntBASIC14.09□□□□□ -0.15
SRFBP1Q8NEF9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms