Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 TEKT4P2-202ENST00000559466 1312 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 RNA5SP417-201ENST00000516459 108 ntBASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 MIR2392-201ENST00000584881 84 ntBASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 SIGLEC22P-201ENST00000599104 714 ntBASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 IL9RP3-201ENST00000442856 1674 ntBASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 BRD7P5-201ENST00000299197 1822 ntBASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS4Q8IUM7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 DPY19L2P5-201ENST00000456300 331 ntBASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 RN7SL665P-201ENST00000578793 300 ntBASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS4Q8IUM7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms