Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC28Q86X40 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC28Q86X40 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC023794.5-201ENST00000564380 2157 ntBASIC13.18□□□□□ -0.3
LRRC28Q86X40 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC098614.1-201ENST00000368528 745 ntBASIC13.18□□□□□ -0.3
LRRC28Q86X40 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 RN7SL399P-201ENST00000471648 279 ntBASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC093726.1-201ENST00000608064 963 ntBASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRC28Q86X40 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRC28Q86X40 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC28Q86X40 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC28Q86X40 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms