Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AGGF1P1-201ENST00000509500 2073 ntBASIC15.63■□□□□ 0.09
TTC30AQ86WT1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 AC006033.1-201ENST00000440505 426 ntBASIC15.63■□□□□ 0.09
TTC30AQ86WT1 MTX1P1-201ENST00000440904 838 ntBASIC15.63■□□□□ 0.09
TTC30AQ86WT1 HSPB1P2-201ENST00000448722 546 ntBASIC15.63■□□□□ 0.09
TTC30AQ86WT1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.63■□□□□ 0.09
TTC30AQ86WT1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.63■□□□□ 0.09
TTC30AQ86WT1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL009178.2-201ENST00000597278 2719 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 KRT8P13-201ENST00000463294 1010 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AC022447.6-201ENST00000515522 438 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AC009955.4-201ENST00000597192 544 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AC008825.2-201ENST00000603374 718 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL096828.3-201ENST00000615354 462 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL139099.5-201ENST00000635274 300 ntBASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TTC30AQ86WT1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 AC015688.4-201ENST00000580780 1647 ntBASIC15.61■□□□□ 0.09
TTC30AQ86WT1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TTC30AQ86WT1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms