Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 PIFO-201ENST00000369737 746 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AL353622.2-201ENST00000605846 425 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC080013.5-201ENST00000607044 679 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 NHP2P1-201ENST00000335274 462 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AL080243.1-201ENST00000423293 1060 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC027612.2-202ENST00000445955 1199 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 RN7SL173P-201ENST00000461853 292 ntBASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CSMD3Q7Z407 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AC006328.1-201ENST00000437571 379 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 IGHVIII-5-2-201ENST00000522505 261 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 RN7SL556P-201ENST00000582856 298 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 LAP3P2-201ENST00000454686 1454 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 SNORA57-201ENST00000383870 149 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 ZNF877P-201ENST00000437614 612 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 LY6E-215ENST00000523847 427 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AC091769.1-201ENST00000619576 568 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AC009093.10-201ENST00000641956 1442 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AL121949.3-201ENST00000406684 385 ntBASIC9.94□□□□□ -0.82
CSMD3Q7Z407 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC9.94□□□□□ -0.82
CSMD3Q7Z407 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms