Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 MIR4683-201ENST00000579659 81 ntBASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 EEF1DP1-201ENST00000585891 896 ntBASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NUP54Q7Z3B4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 DMBT1P1-203ENST00000636837 4628 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AC092135.3-201ENST00000624151 1846 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 RN7SL560P-201ENST00000577943 264 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 MIR4741-201ENST00000579822 90 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL136172.1-201ENST00000598590 1394 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AL031595.1-201ENST00000623969 4709 ntBASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP54Q7Z3B4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms