Protein–RNA interactions for Protein: Q7L5N7

LPCAT2, Lysophosphatidylcholine acyltransferase 2, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2Q7L5N7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AC091046.1-201ENST00000331871 207 ntBASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AC013355.1-201ENST00000562625 723 ntBASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 RN7SL163P-201ENST00000583100 276 ntBASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AL645939.5-201ENST00000606834 243 ntBASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LPCAT2Q7L5N7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC005252.3-201ENST00000623855 2258 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 DPM3-202ENST00000368399 517 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC253536.4-201ENST00000440539 267 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 LDHBP1-201ENST00000455730 1119 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 TUBB8P8-201ENST00000458717 1058 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC024681.1-201ENST00000521917 487 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AP003171.2-201ENST00000528208 925 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC026740.1-201ENST00000607068 791 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC138466.3-201ENST00000619983 221 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 AC008132.1-202ENST00000342005 1389 ntBASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.09■□□□□ 0.01
LPCAT2Q7L5N7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.08■□□□□ 0.01
LPCAT2Q7L5N7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms