Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AL512638.1-201ENST00000457493 794 ntBASIC13.13□□□□□ -0.31
ODF4Q2M2E3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AP001160.2-201ENST00000596071 487 ntBASIC13.13□□□□□ -0.31
ODF4Q2M2E3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 CICP16-201ENST00000502609 2813 ntBASIC13.13□□□□□ -0.31
ODF4Q2M2E3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.13□□□□□ -0.31
ODF4Q2M2E3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 RN7SL399P-201ENST00000471648 279 ntBASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 DOC2GP-202ENST00000514950 1163 ntBASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AP001582.1-201ENST00000525856 295 ntBASIC13.12□□□□□ -0.31
ODF4Q2M2E3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 RARRES2P5-201ENST00000564013 466 ntBASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AL390955.2-201ENST00000603032 514 ntBASIC13.12□□□□□ -0.31
ODF4Q2M2E3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF4Q2M2E3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF4Q2M2E3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms