Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC139712.1-201ENST00000378256 1875 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC064801.2-201ENST00000625052 1303 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 RPL37AP1-201ENST00000412502 279 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AL627223.1-201ENST00000416693 442 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 GPS2P2-201ENST00000430745 888 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC026410.3-201ENST00000514280 936 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 TIMM17BP1-201ENST00000545713 516 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 AL512361.1-201ENST00000554200 418 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC051619.7-201ENST00000568314 623 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 MIR4453-201ENST00000584019 89 ntBASIC12.47□□□□□ -0.41
SSBP1Q04837 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP1Q04837 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP1Q04837 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP1Q04837 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SSBP1Q04837 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
SSBP1Q04837 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP1Q04837 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP1Q04837 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SSBP1Q04837 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP1Q04837 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms