Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 HIST2H2BC-201ENST00000498492 580 ntBASIC13.76□□□□□ -0.21
PER3P56645 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.76□□□□□ -0.21
PER3P56645 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.76□□□□□ -0.21
PER3P56645 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.76□□□□□ -0.21
PER3P56645 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 AL096828.3-201ENST00000615354 462 ntBASIC13.76□□□□□ -0.21
PER3P56645 AC091812.3-201ENST00000621362 345 ntBASIC13.76□□□□□ -0.21
PER3P56645 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 AC091951.1-201ENST00000512854 2465 ntBASIC13.76□□□□□ -0.21
PER3P56645 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 CICP8-201ENST00000455800 2813 ntBASIC13.76□□□□□ -0.21
PER3P56645 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 AC087481.3-201ENST00000602886 1894 ntBASIC13.76□□□□□ -0.21
PER3P56645 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
PER3P56645 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
PER3P56645 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PER3P56645 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
PER3P56645 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 DGCR9-201ENST00000609630 2415 ntBASIC13.75□□□□□ -0.21
PER3P56645 PTENP1-202ENST00000532280 3996 ntBASIC13.75□□□□□ -0.21
PER3P56645 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PER3P56645 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 COL6A4P2-202ENST00000504443 2753 ntBASIC13.75□□□□□ -0.21
PER3P56645 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
PER3P56645 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.75□□□□□ -0.21
PER3P56645 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 COX5BP1-201ENST00000507622 393 ntBASIC13.75□□□□□ -0.21
PER3P56645 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.75□□□□□ -0.21
PER3P56645 RN7SL48P-201ENST00000579283 293 ntBASIC13.75□□□□□ -0.21
PER3P56645 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.75□□□□□ -0.21
PER3P56645 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PER3P56645 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PER3P56645 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PER3P56645 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PER3P56645 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
PER3P56645 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PER3P56645 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
PER3P56645 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PER3P56645 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms