Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
FOXG1P55316 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.87□□□□□ -0.35
FOXG1P55316 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.87□□□□□ -0.35
FOXG1P55316 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 TUBB8P8-201ENST00000458717 1058 ntBASIC12.87□□□□□ -0.35
FOXG1P55316 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.87□□□□□ -0.35
FOXG1P55316 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
FOXG1P55316 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.87□□□□□ -0.35
FOXG1P55316 AC008805.1-201ENST00000590892 364 ntBASIC12.87□□□□□ -0.35
FOXG1P55316 AC068418.2-201ENST00000577309 3703 ntBASIC12.87□□□□□ -0.35
FOXG1P55316 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.87□□□□□ -0.35
FOXG1P55316 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.87□□□□□ -0.35
FOXG1P55316 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
FOXG1P55316 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FOXG1P55316 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 AC023908.3-201ENST00000564211 3047 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
FOXG1P55316 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 AC012441.2-201ENST00000444843 739 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 KRT8P13-201ENST00000463294 1010 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 HLA-J-204ENST00000495278 958 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 AC012617.1-204ENST00000586340 2305 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.86□□□□□ -0.35
FOXG1P55316 AC011498.7-201ENST00000624986 2027 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
FOXG1P55316 AC144522.1-201ENST00000625111 1658 ntBASIC12.86□□□□□ -0.35
FOXG1P55316 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
FOXG1P55316 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FOXG1P55316 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
FOXG1P55316 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms