Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 EIF4HP1-201ENST00000453115 687 ntBASIC15□□□□□ -0.01
CDH4P55283 AKR7A2P1-201ENST00000460134 915 ntBASIC15□□□□□ -0.01
CDH4P55283 MARK2P5-201ENST00000507649 634 ntBASIC15□□□□□ -0.01
CDH4P55283 SCARNA20.5-201ENST00000516991 142 ntBASIC15□□□□□ -0.01
CDH4P55283 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15□□□□□ -0.01
CDH4P55283 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15□□□□□ -0.01
CDH4P55283 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15□□□□□ -0.01
CDH4P55283 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15□□□□□ -0.01
CDH4P55283 AC103810.3-201ENST00000583567 96 ntBASIC15□□□□□ -0.01
CDH4P55283 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 AC232323.1-201ENST00000540724 2099 ntBASIC15□□□□□ -0.01
CDH4P55283 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15□□□□□ -0.01
CDH4P55283 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CDH4P55283 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH4P55283 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15□□□□□ -0.01
CDH4P55283 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 CYP4F23P-201ENST00000593402 1579 ntBASIC14.99□□□□□ -0.01
CDH4P55283 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH4P55283 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH4P55283 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH4P55283 BX284668.4-201ENST00000453917 508 ntBASIC14.99□□□□□ -0.01
CDH4P55283 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH4P55283 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH4P55283 AL132994.2-201ENST00000603120 687 ntBASIC14.99□□□□□ -0.01
CDH4P55283 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH4P55283 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 AC103702.1-201ENST00000548801 2630 ntBASIC14.99□□□□□ -0.01
CDH4P55283 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH4P55283 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH4P55283 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH4P55283 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH4P55283 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CDH4P55283 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH4P55283 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms