Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHBP55084 TCAF1P1-201ENST00000414990 2232 ntBASIC15.34■□□□□ 0.05
HADHBP55084 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HADHBP55084 AL136309.1-201ENST00000403917 691 ntBASIC15.34■□□□□ 0.05
HADHBP55084 AC010141.1-201ENST00000411585 623 ntBASIC15.34■□□□□ 0.05
HADHBP55084 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHBP55084 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.34■□□□□ 0.05
HADHBP55084 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.34■□□□□ 0.05
HADHBP55084 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.34■□□□□ 0.05
HADHBP55084 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.34■□□□□ 0.05
HADHBP55084 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.34■□□□□ 0.05
HADHBP55084 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHBP55084 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHBP55084 MIR4683-201ENST00000579659 81 ntBASIC15.34■□□□□ 0.05
HADHBP55084 KRT18P8-201ENST00000581937 1246 ntBASIC15.34■□□□□ 0.05
HADHBP55084 RN7SL713P-201ENST00000582127 302 ntBASIC15.34■□□□□ 0.05
HADHBP55084 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HADHBP55084 AL358472.3-201ENST00000608147 415 ntBASIC15.34■□□□□ 0.05
HADHBP55084 AC006453.4-201ENST00000636949 1252 ntBASIC15.34■□□□□ 0.05
HADHBP55084 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HADHBP55084 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHBP55084 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HADHBP55084 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHBP55084 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HADHBP55084 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HADHBP55084 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HADHBP55084 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.33■□□□□ 0.05
HADHBP55084 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.33■□□□□ 0.05
HADHBP55084 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.33■□□□□ 0.05
HADHBP55084 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HADHBP55084 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HADHBP55084 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
HADHBP55084 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HADHBP55084 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HADHBP55084 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
HADHBP55084 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHBP55084 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHBP55084 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.33■□□□□ 0.04
HADHBP55084 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 AC073413.1-201ENST00000603927 732 ntBASIC15.33■□□□□ 0.04
HADHBP55084 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HADHBP55084 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 CICP17-201ENST00000418553 2377 ntBASIC15.33■□□□□ 0.04
HADHBP55084 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.33■□□□□ 0.04
HADHBP55084 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.33■□□□□ 0.04
HADHBP55084 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.32■□□□□ 0.04
HADHBP55084 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHBP55084 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.32■□□□□ 0.04
HADHBP55084 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
HADHBP55084 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HADHBP55084 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.32■□□□□ 0.04
HADHBP55084 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.32■□□□□ 0.04
HADHBP55084 CNN2P8-201ENST00000421872 913 ntBASIC15.32■□□□□ 0.04
HADHBP55084 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHBP55084 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHBP55084 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.32■□□□□ 0.04
HADHBP55084 CRB3P1-201ENST00000449338 276 ntBASIC15.32■□□□□ 0.04
HADHBP55084 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.32■□□□□ 0.04
HADHBP55084 AL590640.2-201ENST00000457038 527 ntBASIC15.32■□□□□ 0.04
HADHBP55084 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.32■□□□□ 0.04
HADHBP55084 TERF1P3-201ENST00000505638 1227 ntBASIC15.32■□□□□ 0.04
HADHBP55084 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.32■□□□□ 0.04
HADHBP55084 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HADHBP55084 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms