Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 AC073352.2-201ENST00000609385 439 ntBASIC15.82■□□□□ 0.12
VCPP55072 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 LILRP1-201ENST00000444199 1370 ntBASIC15.82■□□□□ 0.12
VCPP55072 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VCPP55072 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
VCPP55072 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VCPP55072 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VCPP55072 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCPP55072 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.81■□□□□ 0.12
VCPP55072 ACTG1P2-201ENST00000415776 1125 ntBASIC15.81■□□□□ 0.12
VCPP55072 CD8B2-202ENST00000417670 633 ntBASIC15.81■□□□□ 0.12
VCPP55072 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 ACTG1P11-201ENST00000425411 1125 ntBASIC15.81■□□□□ 0.12
VCPP55072 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 AC004066.1-201ENST00000502488 802 ntBASIC15.81■□□□□ 0.12
VCPP55072 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.81■□□□□ 0.12
VCPP55072 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VCPP55072 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.81■□□□□ 0.12
VCPP55072 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
VCPP55072 PGAM1P5-201ENST00000548011 764 ntBASIC15.81■□□□□ 0.12
VCPP55072 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.81■□□□□ 0.12
VCPP55072 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.81■□□□□ 0.12
VCPP55072 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.81■□□□□ 0.12
VCPP55072 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
VCPP55072 AC011491.1-203ENST00000637688 543 ntBASIC15.81■□□□□ 0.12
VCPP55072 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VCPP55072 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VCPP55072 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.81■□□□□ 0.12
VCPP55072 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
VCPP55072 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.8■□□□□ 0.12
VCPP55072 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.8■□□□□ 0.12
VCPP55072 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.8■□□□□ 0.12
VCPP55072 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
VCPP55072 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.8■□□□□ 0.12
VCPP55072 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VCPP55072 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.8■□□□□ 0.12
VCPP55072 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VCPP55072 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms