Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 RN7SL832P-201ENST00000607781 1756 ntBASIC16.56■□□□□ 0.24
USP11P51784 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
USP11P51784 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
USP11P51784 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 AL161932.2-201ENST00000435436 679 ntBASIC16.56■□□□□ 0.24
USP11P51784 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.56■□□□□ 0.24
USP11P51784 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 AC003686.1-201ENST00000550956 1034 ntBASIC16.56■□□□□ 0.24
USP11P51784 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.56■□□□□ 0.24
USP11P51784 AC013355.1-201ENST00000562625 723 ntBASIC16.56■□□□□ 0.24
USP11P51784 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.56■□□□□ 0.24
USP11P51784 AL132994.2-201ENST00000603120 687 ntBASIC16.56■□□□□ 0.24
USP11P51784 AL451050.2-201ENST00000606967 682 ntBASIC16.56■□□□□ 0.24
USP11P51784 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
USP11P51784 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 NFIC-211ENST00000641145 8399 ntBASIC16.56■□□□□ 0.24
USP11P51784 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP11P51784 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.56■□□□□ 0.24
USP11P51784 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.56■□□□□ 0.24
USP11P51784 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 AC005912.2-201ENST00000619492 2400 ntBASIC16.55■□□□□ 0.24
USP11P51784 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 MARK2P5-201ENST00000507649 634 ntBASIC16.55■□□□□ 0.24
USP11P51784 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 AC244452.3-201ENST00000636814 210 ntBASIC16.55■□□□□ 0.24
USP11P51784 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.55■□□□□ 0.24
USP11P51784 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP11P51784 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.55■□□□□ 0.24
USP11P51784 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 AC064801.2-201ENST00000625052 1303 ntBASIC16.54■□□□□ 0.24
USP11P51784 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms