Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 AC008026.2-201ENST00000495438 348 ntBASIC15.93■□□□□ 0.14
BRCA2P51587 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.93■□□□□ 0.14
BRCA2P51587 IFNL3P1-201ENST00000595082 501 ntBASIC15.93■□□□□ 0.14
BRCA2P51587 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.93■□□□□ 0.14
BRCA2P51587 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
BRCA2P51587 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.93■□□□□ 0.14
BRCA2P51587 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.93■□□□□ 0.14
BRCA2P51587 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.93■□□□□ 0.14
BRCA2P51587 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BRCA2P51587 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.93■□□□□ 0.14
BRCA2P51587 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
BRCA2P51587 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.93■□□□□ 0.14
BRCA2P51587 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRCA2P51587 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
BRCA2P51587 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 AC120498.7-201ENST00000562876 330 ntBASIC15.92■□□□□ 0.14
BRCA2P51587 ODCP-201ENST00000459650 1639 ntBASIC15.92■□□□□ 0.14
BRCA2P51587 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.92■□□□□ 0.14
BRCA2P51587 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.92■□□□□ 0.14
BRCA2P51587 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC15.92■□□□□ 0.14
BRCA2P51587 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRCA2P51587 AC022447.5-201ENST00000504817 392 ntBASIC15.92■□□□□ 0.14
BRCA2P51587 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.92■□□□□ 0.14
BRCA2P51587 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC15.92■□□□□ 0.14
BRCA2P51587 AC016582.2-202ENST00000587765 1094 ntBASIC15.92■□□□□ 0.14
BRCA2P51587 EMP3-204ENST00000596315 761 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 AC097359.2-201ENST00000604992 2389 ntBASIC15.92■□□□□ 0.14
BRCA2P51587 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.92■□□□□ 0.14
BRCA2P51587 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 RBPMSLP-201ENST00000433427 502 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 AC091304.3-201ENST00000566500 716 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 AC026336.4-201ENST00000624565 1050 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.91■□□□□ 0.14
BRCA2P51587 AC015912.3-201ENST00000619432 348 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 ACE3P-201ENST00000423435 1973 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.91■□□□□ 0.14
BRCA2P51587 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 PDXDC2P-206ENST00000534700 1315 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.91■□□□□ 0.14
BRCA2P51587 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 U73169.1-201ENST00000395152 367 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.91■□□□□ 0.14
BRCA2P51587 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 URB1-AS1-201ENST00000534991 831 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.91■□□□□ 0.14
BRCA2P51587 AC113385.2-201ENST00000614465 762 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.91■□□□□ 0.14
BRCA2P51587 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRCA2P51587 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms