Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.32■□□□□ 0.2
TM4SF4P48230 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.32■□□□□ 0.2
TM4SF4P48230 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.32■□□□□ 0.2
TM4SF4P48230 RN7SL455P-201ENST00000580629 282 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.32■□□□□ 0.2
TM4SF4P48230 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 PRMT1P1-201ENST00000604252 1009 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AC126755.5-201ENST00000622756 267 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AC117503.4-201ENST00000623229 1418 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 AL008638.4-201ENST00000624792 1315 ntBASIC16.32■□□□□ 0.2
TM4SF4P48230 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.32■□□□□ 0.2
TM4SF4P48230 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM4SF4P48230 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TM4SF4P48230 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TM4SF4P48230 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TM4SF4P48230 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TM4SF4P48230 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.31■□□□□ 0.2
TM4SF4P48230 AL161932.2-201ENST00000435436 679 ntBASIC16.31■□□□□ 0.2
TM4SF4P48230 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.31■□□□□ 0.2
TM4SF4P48230 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.31■□□□□ 0.2
TM4SF4P48230 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.31■□□□□ 0.2
TM4SF4P48230 AC147876.1-201ENST00000504408 322 ntBASIC16.31■□□□□ 0.2
TM4SF4P48230 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.31■□□□□ 0.2
TM4SF4P48230 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.31■□□□□ 0.2
TM4SF4P48230 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.31■□□□□ 0.2
TM4SF4P48230 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.31■□□□□ 0.2
TM4SF4P48230 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM4SF4P48230 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.3■□□□□ 0.2
TM4SF4P48230 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 FAM226B-201ENST00000602508 1490 ntBASIC16.3■□□□□ 0.2
TM4SF4P48230 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.3■□□□□ 0.2
TM4SF4P48230 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.3■□□□□ 0.2
TM4SF4P48230 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TM4SF4P48230 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 RPSAP12-201ENST00000435879 888 ntBASIC16.3■□□□□ 0.2
TM4SF4P48230 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.3■□□□□ 0.2
TM4SF4P48230 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TM4SF4P48230 AL591424.3-201ENST00000614278 872 ntBASIC16.3■□□□□ 0.2
TM4SF4P48230 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.3■□□□□ 0.2
TM4SF4P48230 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TM4SF4P48230 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM4SF4P48230 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TM4SF4P48230 RPL13AP3-202ENST00000494676 1473 ntBASIC16.29■□□□□ 0.2
TM4SF4P48230 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM4SF4P48230 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TM4SF4P48230 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms