Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4P46934 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4P46934 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD4P46934 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD4P46934 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4P46934 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD4P46934 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD4P46934 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4P46934 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.23■□□□□ 0.35
NEDD4P46934 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.23■□□□□ 0.35
NEDD4P46934 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NEDD4P46934 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NEDD4P46934 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NEDD4P46934 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 AC027601.5-201ENST00000624065 2482 ntBASIC17.23■□□□□ 0.35
NEDD4P46934 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.23■□□□□ 0.35
NEDD4P46934 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NEDD4P46934 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4P46934 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4P46934 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.22■□□□□ 0.35
NEDD4P46934 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4P46934 AC013355.1-201ENST00000562625 723 ntBASIC17.22■□□□□ 0.35
NEDD4P46934 AC090164.2-201ENST00000611487 516 ntBASIC17.22■□□□□ 0.35
NEDD4P46934 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4P46934 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NEDD4P46934 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4P46934 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4P46934 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4P46934 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4P46934 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4P46934 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4P46934 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD4P46934 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.21■□□□□ 0.35
NEDD4P46934 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4P46934 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD4P46934 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.21■□□□□ 0.35
NEDD4P46934 MIR6074-201ENST00000612054 107 ntBASIC17.21■□□□□ 0.35
NEDD4P46934 AP000346.4-201ENST00000614827 381 ntBASIC17.21■□□□□ 0.35
NEDD4P46934 AC133540.1-201ENST00000620845 1019 ntBASIC17.21■□□□□ 0.35
NEDD4P46934 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD4P46934 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4P46934 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD4P46934 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 AC020907.1-201ENST00000616460 1350 ntBASIC17.21■□□□□ 0.35
NEDD4P46934 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4P46934 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms