Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP13P45452 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP13P45452 AC090505.1-201ENST00000430515 1834 ntBASIC15.36■□□□□ 0.05
MMP13P45452 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP13P45452 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP13P45452 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP13P45452 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP13P45452 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
MMP13P45452 INE2-201ENST00000630399 1874 ntBASIC15.35■□□□□ 0.05
MMP13P45452 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MMP13P45452 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.35■□□□□ 0.05
MMP13P45452 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.35■□□□□ 0.05
MMP13P45452 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP13P45452 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.35■□□□□ 0.05
MMP13P45452 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP13P45452 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.35■□□□□ 0.05
MMP13P45452 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MMP13P45452 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MMP13P45452 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MMP13P45452 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.34■□□□□ 0.05
MMP13P45452 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP13P45452 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 KRT43P-201ENST00000434019 910 ntBASIC15.34■□□□□ 0.05
MMP13P45452 C2orf27AP3-201ENST00000434123 579 ntBASIC15.34■□□□□ 0.05
MMP13P45452 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP13P45452 FO681548.1-201ENST00000455617 1132 ntBASIC15.34■□□□□ 0.05
MMP13P45452 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP13P45452 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.34■□□□□ 0.05
MMP13P45452 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.34■□□□□ 0.05
MMP13P45452 AC025279.2-201ENST00000569730 653 ntBASIC15.34■□□□□ 0.05
MMP13P45452 RN7SL48P-201ENST00000579283 293 ntBASIC15.34■□□□□ 0.05
MMP13P45452 AC004466.1-201ENST00000599515 1080 ntBASIC15.34■□□□□ 0.05
MMP13P45452 AL354718.3-201ENST00000616414 581 ntBASIC15.34■□□□□ 0.05
MMP13P45452 ENPP7P14-201ENST00000621765 1040 ntBASIC15.34■□□□□ 0.05
MMP13P45452 CR382287.1-201ENST00000623954 586 ntBASIC15.34■□□□□ 0.05
MMP13P45452 AL035252.4-201ENST00000624174 288 ntBASIC15.34■□□□□ 0.05
MMP13P45452 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MMP13P45452 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms