Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.19■□□□□ 0.02
CDKN2BP42772 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 AC009093.10-201ENST00000641956 1442 ntBASIC15.19■□□□□ 0.02
CDKN2BP42772 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 AC126755.1-201ENST00000525846 6405 ntBASIC15.19■□□□□ 0.02
CDKN2BP42772 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.19■□□□□ 0.02
CDKN2BP42772 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.19■□□□□ 0.02
CDKN2BP42772 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.19■□□□□ 0.02
CDKN2BP42772 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.19■□□□□ 0.02
CDKN2BP42772 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDKN2BP42772 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.19■□□□□ 0.02
CDKN2BP42772 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.19■□□□□ 0.02
CDKN2BP42772 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.18■□□□□ 0.02
CDKN2BP42772 AL161932.2-201ENST00000435436 679 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 CICP12-201ENST00000455801 843 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 AC007551.1-201ENST00000457394 519 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 COX5BP1-201ENST00000507622 393 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2BP42772 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2BP42772 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 AC089987.1-201ENST00000551654 2209 ntBASIC15.18■□□□□ 0.02
CDKN2BP42772 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.18■□□□□ 0.02
CDKN2BP42772 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.18■□□□□ 0.02
CDKN2BP42772 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDKN2BP42772 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDKN2BP42772 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKN2BP42772 TUBB8P4-201ENST00000511806 1324 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms