Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC6A4P31645 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.05■□□□□ -0
SLC6A4P31645 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.05■□□□□ -0
SLC6A4P31645 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 AC011742.3-201ENST00000439053 820 ntBASIC15.05■□□□□ -0
SLC6A4P31645 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.05■□□□□ -0
SLC6A4P31645 RCC2P8-201ENST00000502779 1035 ntBASIC15.05■□□□□ -0
SLC6A4P31645 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
SLC6A4P31645 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A4P31645 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 AL805961.1-203ENST00000641078 1258 ntBASIC15.05■□□□□ -0
SLC6A4P31645 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.05■□□□□ -0
SLC6A4P31645 AL390755.1-201ENST00000623716 2027 ntBASIC15.05■□□□□ -0
SLC6A4P31645 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A4P31645 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A4P31645 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 INTS4P1-203ENST00000641008 3683 ntBASIC15.04■□□□□ -0
SLC6A4P31645 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC6A4P31645 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC6A4P31645 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 AC078875.1-201ENST00000431907 724 ntBASIC15.04■□□□□ -0
SLC6A4P31645 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 IGHJ2P-201ENST00000454480 60 ntBASIC15.04■□□□□ -0
SLC6A4P31645 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.04■□□□□ -0
SLC6A4P31645 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.04■□□□□ -0
SLC6A4P31645 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.04■□□□□ -0
SLC6A4P31645 AC027237.1-201ENST00000560942 655 ntBASIC15.04■□□□□ -0
SLC6A4P31645 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.04■□□□□ -0
SLC6A4P31645 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.04■□□□□ -0
SLC6A4P31645 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
SLC6A4P31645 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC6A4P31645 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A4P31645 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC6A4P31645 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 AC018629.1-201ENST00000623381 1736 ntBASIC15.03■□□□□ -0
SLC6A4P31645 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 AC097359.2-201ENST00000604992 2389 ntBASIC15.03■□□□□ -0
SLC6A4P31645 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 RN7SKP214-201ENST00000364208 315 ntBASIC15.03■□□□□ -0
SLC6A4P31645 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.03■□□□□ -0
SLC6A4P31645 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.03■□□□□ -0
SLC6A4P31645 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.03■□□□□ -0
SLC6A4P31645 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms