Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EPHA3P29320 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
EPHA3P29320 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
EPHA3P29320 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA3P29320 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 NUTM2HP-201ENST00000442076 2498 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 AC073548.1-201ENST00000624088 1882 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 TLE1P1-201ENST00000422965 589 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.38□□□□□ -0.11
EPHA3P29320 AC004967.1-201ENST00000453589 447 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.38□□□□□ -0.11
EPHA3P29320 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.38□□□□□ -0.11
EPHA3P29320 SPDYE22P-201ENST00000582158 798 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 AC008738.7-201ENST00000609744 511 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 AC004840.1-201ENST00000636359 365 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EPHA3P29320 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EPHA3P29320 MRPL37P1-201ENST00000592451 1337 ntBASIC14.38□□□□□ -0.11
EPHA3P29320 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
EPHA3P29320 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.38□□□□□ -0.11
EPHA3P29320 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EPHA3P29320 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
EPHA3P29320 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 AC241585.1-201ENST00000433527 519 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms