Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ABCD3P28288 MIR663B-201ENST00000408361 115 ntBASIC13.58□□□□□ -0.24
ABCD3P28288 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.58□□□□□ -0.24
ABCD3P28288 AL591846.1-201ENST00000451736 433 ntBASIC13.58□□□□□ -0.24
ABCD3P28288 TPT1P11-201ENST00000458482 498 ntBASIC13.58□□□□□ -0.24
ABCD3P28288 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.58□□□□□ -0.24
ABCD3P28288 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 AC005695.3-201ENST00000614522 232 ntBASIC13.58□□□□□ -0.24
ABCD3P28288 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.58□□□□□ -0.24
ABCD3P28288 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ABCD3P28288 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ABCD3P28288 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.58□□□□□ -0.24
ABCD3P28288 OR2I1P-209ENST00000641730 5365 ntBASIC13.58□□□□□ -0.24
ABCD3P28288 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCD3P28288 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.57□□□□□ -0.24
ABCD3P28288 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ABCD3P28288 ACTBP11-201ENST00000436287 1126 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.57□□□□□ -0.24
ABCD3P28288 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 MIR4783-201ENST00000580343 82 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 AL162426.1-201ENST00000624141 743 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 AC005089.1-201ENST00000619486 2241 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.57□□□□□ -0.24
ABCD3P28288 AP001267.2-201ENST00000532619 2086 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCD3P28288 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms