Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 AC236430.1-201ENST00000402231 743 ntBASIC14.93□□□□□ -0.02
CCND1P24385 TPT1P11-201ENST00000458482 498 ntBASIC14.93□□□□□ -0.02
CCND1P24385 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.93□□□□□ -0.02
CCND1P24385 SAMD11P1-201ENST00000571429 661 ntBASIC14.93□□□□□ -0.02
CCND1P24385 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCND1P24385 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCND1P24385 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.93□□□□□ -0.02
CCND1P24385 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCND1P24385 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 AL645937.2-201ENST00000396808 931 ntBASIC14.92□□□□□ -0.02
CCND1P24385 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.92□□□□□ -0.02
CCND1P24385 AC123567.1-201ENST00000548294 1261 ntBASIC14.92□□□□□ -0.02
CCND1P24385 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.92□□□□□ -0.02
CCND1P24385 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.92□□□□□ -0.02
CCND1P24385 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.92□□□□□ -0.02
CCND1P24385 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 AC016397.2-201ENST00000624848 1985 ntBASIC14.92□□□□□ -0.02
CCND1P24385 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCND1P24385 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCND1P24385 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.92□□□□□ -0.02
CCND1P24385 INTS4P2-202ENST00000614726 2019 ntBASIC14.92□□□□□ -0.02
CCND1P24385 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCND1P24385 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCND1P24385 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.91□□□□□ -0.02
CCND1P24385 CICP16-201ENST00000502609 2813 ntBASIC14.91□□□□□ -0.02
CCND1P24385 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCND1P24385 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CCND1P24385 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.91□□□□□ -0.02
CCND1P24385 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCND1P24385 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.91□□□□□ -0.02
CCND1P24385 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms