Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NCK1P16333 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NCK1P16333 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NCK1P16333 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NCK1P16333 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NCK1P16333 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 AC072061.1-201ENST00000569710 2234 ntBASIC13.97□□□□□ -0.17
NCK1P16333 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 AL139400.1-201ENST00000366220 510 ntBASIC13.97□□□□□ -0.17
NCK1P16333 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.97□□□□□ -0.17
NCK1P16333 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 AC092865.5-201ENST00000545435 363 ntBASIC13.97□□□□□ -0.17
NCK1P16333 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 DUX4L47-201ENST00000566374 394 ntBASIC13.97□□□□□ -0.17
NCK1P16333 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 MIR3687-2-201ENST00000577708 61 ntBASIC13.97□□□□□ -0.17
NCK1P16333 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 AC027612.4-201ENST00000605371 583 ntBASIC13.97□□□□□ -0.17
NCK1P16333 MIR3687-1-201ENST00000614492 61 ntBASIC13.97□□□□□ -0.17
NCK1P16333 Z92544.3-201ENST00000624747 417 ntBASIC13.97□□□□□ -0.17
NCK1P16333 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.97□□□□□ -0.17
NCK1P16333 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NCK1P16333 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NCK1P16333 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NCK1P16333 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.96□□□□□ -0.17
NCK1P16333 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 AC114501.2-201ENST00000439631 535 ntBASIC13.96□□□□□ -0.17
NCK1P16333 VDAC1P7-201ENST00000462417 847 ntBASIC13.96□□□□□ -0.17
NCK1P16333 FAM86LP-201ENST00000478302 853 ntBASIC13.96□□□□□ -0.17
NCK1P16333 AC125807.1-201ENST00000483097 614 ntBASIC13.96□□□□□ -0.17
NCK1P16333 SPDYE18-201ENST00000510091 1050 ntBASIC13.96□□□□□ -0.17
NCK1P16333 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.96□□□□□ -0.17
NCK1P16333 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 AL049840.4-201ENST00000602422 811 ntBASIC13.96□□□□□ -0.17
NCK1P16333 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms