Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.42□□□□□ -0.26
HMGN1P05114 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 AC003102.2-201ENST00000589195 1469 ntBASIC13.42□□□□□ -0.26
HMGN1P05114 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGN1P05114 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 AC134915.1-201ENST00000426461 574 ntBASIC13.41□□□□□ -0.26
HMGN1P05114 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 IGHV3-42-201ENST00000520410 361 ntBASIC13.41□□□□□ -0.26
HMGN1P05114 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
HMGN1P05114 RRP7BP-205ENST00000566851 833 ntBASIC13.41□□□□□ -0.26
HMGN1P05114 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.41□□□□□ -0.26
HMGN1P05114 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGN1P05114 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGN1P05114 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGN1P05114 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGN1P05114 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HMGN1P05114 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 DGCR9-201ENST00000609630 2415 ntBASIC13.4□□□□□ -0.26
HMGN1P05114 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HMGN1P05114 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HMGN1P05114 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMGN1P05114 MIR943-201ENST00000401286 94 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms