Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
APOA1P02647 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 FAM197Y8-203ENST00000450145 560 ntBASIC13.2□□□□□ -0.3
APOA1P02647 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 AC092910.1-201ENST00000482027 1129 ntBASIC13.2□□□□□ -0.3
APOA1P02647 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.2□□□□□ -0.3
APOA1P02647 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 AC015910.1-201ENST00000579400 975 ntBASIC13.2□□□□□ -0.3
APOA1P02647 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 AC020910.6-201ENST00000623084 1459 ntBASIC13.2□□□□□ -0.3
APOA1P02647 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 AGGF1P1-201ENST00000509500 2073 ntBASIC13.2□□□□□ -0.3
APOA1P02647 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
APOA1P02647 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
APOA1P02647 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APOA1P02647 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.2□□□□□ -0.3
APOA1P02647 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOA1P02647 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 AKAP8P1-201ENST00000434743 1349 ntBASIC13.19□□□□□ -0.3
APOA1P02647 BCAR1-209ENST00000546196 1340 ntBASIC13.19□□□□□ -0.3
APOA1P02647 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.19□□□□□ -0.3
APOA1P02647 KRT18P67-201ENST00000432816 1264 ntBASIC13.19□□□□□ -0.3
APOA1P02647 AC009947.1-201ENST00000444350 727 ntBASIC13.19□□□□□ -0.3
APOA1P02647 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.19□□□□□ -0.3
APOA1P02647 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.19□□□□□ -0.3
APOA1P02647 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 PRELID1P1-202ENST00000567272 903 ntBASIC13.19□□□□□ -0.3
APOA1P02647 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 AP001972.5-201ENST00000624624 2338 ntBASIC13.19□□□□□ -0.3
APOA1P02647 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms